GFF/GTF

Prebuilt Annotation Data

Load yeast test annotation files (sourced from YeastGenome)

bio_test_artifacts.prebuilt.gtf_yeast_chr01(gzip=False)

Make a GTF that covers yeast chromosome 1.

Parameters

gzip (bool) – Provide a gzipped GTF (.gtf.gz). Defaults to False.

Returns

The absolute paths to the GTF file

Return type

str

bio_test_artifacts.prebuilt.gff_yeast_chr01(gzip=False)

Make a GFF that covers yeast chromosome 1.

Parameters

gzip (bool) – Provide a gzipped GTF (.gff.gz). Defaults to False.

Returns

The absolute paths to the GTF file

Return type

str